Explore projects

Demonstrative source code automatically packaging provenance information for an output of a glucose-insulin simulation model

Subset of publicly available genomic data from the Genome Sequence Archive of the Beijing Institute of Genomics, accessible with the accession ID PRJCA000091.

UMI-Based Preprocessing Pipeline

Tool to notify updates in genetic variant annotations.

A novel affordable and reliable framework for accurate detection and comprehensive analysis of somatic mutations in cancer

MUSTA: a modular pipeline to detect, classify and interpret mutations in cancer

Genomic Hotspot Analysis Pipeline

Estimation of tumor fraction in cell-free DNA (cfDNA).

Beacon v2.x

A complete Laboratory Information Management System for Next Generation Sequencing Laboratories

MUSTA: end-to-end pipeline to detect, classify and interpret mutations in cancer

MUSTA: a modular pipeline to detect, classify and interpret mutations in cancer

SOLIDA is command-line solution that facilitate the reproducibility and portability of NGS pipelines. It can easily organize the deployment, the data management and the execution of a Snakemake based workflow.

miRNA analysis pipeline

solida-core documentation: